Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MGRKWANI-VAK--KTAKDGANSKVYAKFGVEIY----VAAKQGEP--------------DPESNSALKFVLDRAKQAQVPKHVIDKAIDKAKGNT--------DETFVEGRYEGFGPNGSMIIV------------DTLTSNVNRTAANVRTAYGKNG--GNMGASGSVSYLFDKKGVI--VFAGDDADTVFEQLLEADVDVDDVEAEE-GTITVYTAPTDLHKGIQAL-RDNGVEEFQV-TELEMIPQSE---------VVLEGDDLETFEKLIDALE------SDDDVQKVYHNVADF----------- |
| 4PE6 Chain:A ((18-339)) | KPFIALSNGFIGNGWRQTMIAKFEEAAKQAQADGLIGKYKVVNAPGNNSATEQVAQIKSLLLQKPDALLINPASPTALQPVIQQACDAGVKVVVFDSAIDAPCAYILQNSFVDWATYAAKPVLESIGGKGNVIVVRGVVGSQPEAEMYETTKKILAEYPQVKTVATVTGMCDGATAQKAVLGVLPSVSTVDAVIGCGDGYGVAQAFATAGKPIPAVTFETNGRALSYWKDNKIDNGSVAVMSDPAQSVAALWAALDLLEGRDLPKQMTFPIVLIEEKDRDTWASVLKPDEYAAWPWTRELFRQQVEAIKTGGEPVQPPIPST |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PE6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 84330 for 1683 contacts (50.1/contact) +
2D Compatibility (PS) -23953 + (NN) 2229 + (LL) 0
1D Compatibility (HY) 11200 + (ID) 600
Total energy: 73206.0 ( 43.50 by residue)
QMean score : -0.032
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