Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNAKTKLVTDRIRLRCMEDRDQATLFGLLFNDPDVMTYYSGLKDKRQTREWVNWNQRNEKGYGVSLWIAEDKRTGEFLGQCGIVPQQIENQTVMEIGYMFARRHWGNGYAQEAARACLDYGFNERQFGKMAALIDPGNKASIRVAEKIGMHYSKTIRKWNK---------PIAVYERKSYN-
4MI4 Chain:A ((26-195))--------NSQLTLRALE-RGDLRFIHNLNNNRNIMSYW-FEEPYESFDELEELYNKHIHDNAERRFVVEDA-QKNLIGLVELIEINYIHR-SAEFQIIIAPEHQGKGFARTLINRALDYSFTILNLHKIYLHVAVENPKAVHLYEECGFVEEGHLVEEFFINGRYQDVKRMYILQSKYLNR


General information:
TITO was launched using:
RESULT:

Template: 4MI4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 625 -91799 -146.88 -573.74
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -146.88
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.390

(partial model without unconserved sides chains):
PDB file : Tito_4MI4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MI4-query.scw
PDB file : Tito_Scwrl_4MI4.pdb: