Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKYTLIATAPMGIEAVVAKEVRDLGYECKVDNGKVIFEGDALAICRANLWLRTADRIKVQVASFKAKTFDELFEKTKAINWRSFIPENGKFPVIGKSVKSTLASVPDCQRIVKKAIVEKLKLQSGKANDWIEETGAEYKVEISLLKDQALITLDSSGTGLHKRGYRVDQGGAPIKETLAAALVQLTNWTPDRPFVDPFCGSGTIAIEAALIGQNIAPGFNRDFVSEDWEWIGKDLWNKARLEVEEKANYDQPLTIFASDIDHRMVQIAKENAEEAGLGDLIQFKQMQVKDFTTNLEFGVIVGNPPYGERLGEKK---------------------A----VEQMYKEMGQAFEPLDTWSVYMLTSNENFEEAYGRKATKKRKLFNGFIKTDYYQYWSKVRPQRKKTENA
2IH2 Chain:A ((21-168))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------VETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGT-------------------------------------AYRFVGVEIDPKALDLPPW----------AEGILADFLLWEPGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLK--PGGVLVFVVPATW-----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2IH2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 480 -45793 -95.40 -372.30
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -95.40
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.593

(partial model without unconserved sides chains):
PDB file : Tito_2IH2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2IH2-query.scw
PDB file : Tito_Scwrl_2IH2.pdb: