Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIADVLRNKGAAVVTINPDATVGELLAGLAEQNIGAMVVVGAEG-VVGIVSERDVVRQLHTYGASVLSRPVAKIMS------TTVATCTKSDTVDKISVLMTENRVRHVPVLD-GKKLIGIVSIGDVVKSRMGELEAEQQQLQSYITQG
2UV4 Chain:A ((24-150))
-QIGTYA---N--IAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALV-----------------
General information:
TITO was launched using:
RESULT:
Template:
2UV4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83410 for 811 contacts (-102.8/contact) +
2D Compatibility (PS) -12579 + (NN) -3322 + (LL) 1964
1D Compatibility (HY) -10000 + (ID) 1450
Total energy: -108797.0 ( -134.15 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_2UV4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UV4-query.scw
PDB file :
Tito_Scwrl_2UV4.pdb
: