Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDRRRMPLWALLLLWSPCTFSLPTRTATFERIPLKKMPSVREILEERGVDMTRLSAEWGVFTKRPSLTNLTSPVVLTNYLNTQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESSDSSSYMENGSDFTIHYGSGRVKGFLSQDSVTVGGITVTQTFGEVTELPLIPFMLAKFDGVLGMGFPAQAVGGVTPVFDHILSQGVLKEEVFSVYYNRGSHLLGGEVVLGGSDPQHYQGNFHYVSISKTDSWQITMKGVSVGSSTLLCEEGCAVVVDTGSSFISAPTSSLKLIMQALGAKEKRIEEYVVNCSQVPTLPDISFDLGGRAYTLSSTDYVLQYPNRRDKLCTLALHAMDIPPPTGPVWVLGATFIRKFYTEFDRHNNRIGFALAR
3OAG Chain:B ((2-170))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAK-KRLFDYVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR


General information:
TITO was launched using:
RESULT:

Template: 3OAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140894 for 1238 contacts (-113.8/contact) +
2D Compatibility (PS) -18529 + (NN) -10461 + (LL) 13808
1D Compatibility (HY) -20000 + (ID) 6150
Total energy: -182226.0 ( -147.19 by residue)
QMean score : 0.207

(partial model without unconserved sides chains):
PDB file : Tito_3OAG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OAG-query.scw
PDB file : Tito_Scwrl_3OAG.pdb: