Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLP---GHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK
3TQ8 Chain:A ((1-162))
MIITLIAAMDKNRLIGRNNELPWHLPADLAHFKSITLGKPIVMGRRTFDSIGKPLPHRRNIVITQQKNLIIEGCDIFYSLDDALSALTKEPEVIIIGGARIFKEALPKADKMILTIINHSFEGDVYFPEWNDKEWKITSQIKHERD--NPYPFQFLELRRLE
General information:
TITO was launched using:
RESULT:
Template:
3TQ8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121111 for 1184 contacts (-102.3/contact) +
2D Compatibility (PS) -17320 + (NN) -7904 + (LL) 168
1D Compatibility (HY) -16400 + (ID) 3300
Total energy: -165867.0 ( -140.09 by residue)
QMean score : 0.594
(partial model without unconserved sides chains):
PDB file :
Tito_3TQ8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQ8-query.scw
PDB file :
Tito_Scwrl_3TQ8.pdb
: