Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRRSLHAAAVLLLVILKEQPSSPAPVNGSKWTYFGPDGENSWSKKYP---SCG-GLLQSPIDLHSDILQYDASLTPLEFQGYNLSANKQFLLTNNGHSVKLNLPS---DMHIQGLQSRYSATQLHLHWGNPNDPHGSEHTVSGQHFAAELHIVHYNSDLYPDASTASNKSEGLAVLAVLIEMGSFNPSYDKIFSHLQHVKYKGQEAFVPGFNIEELLPERTAEYYRYRGSLTTPPCNPTVLWTVFRNPVQISQEQLLALETALYCTHMDDPSPREMINNFRQVQKFDERLVYTSFSQVQVCTAAGLSLGIILSLALAGILGICIVVVVSIWLFRRKSIKKGDNKGVIYKPATKMETEAHA |
| 1KOP Chain:A ((2-222)) | -----------------------------THWGYTGHDSPESWGNLSEEFRLCSTGKNQSPVNITE---TVSGKLPAIKVN-YKPS---MVDVENNGHTIQVNYPEGGNTLTVNG--RTYTLKQFHFHV-------PSENQIKGRTFPMEAHFVHLDEN------------KQPLVLAVLYEAGKTNGRLSSIWNVMPMTA--GKVKLNQPFDASTLLPKR-LKYYRFAGSLTTPPCTEGVSWLVLKTYDHIDQAQAEKFTRAVG-----------S-ENNRPVQPLNARVVI-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KOP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132380 for 1645 contacts (-80.5/contact) +
2D Compatibility (PS) -22616 + (NN) -7694 + (LL) 8636
1D Compatibility (HY) -14800 + (ID) 3600
Total energy: -172454.0 ( -104.84 by residue)
QMean score : 0.350
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