Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMERPQPDSMPQDLSEALKEATKEVHTQAENAEFMRNFQKGQVTRDGFKLVMASLYHIYVALEEEIERNKESPVFAPVYFPEELHRKAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQKALDLPSSGEGLAFFTFPNIASATKFKQLYRSRMNSLEMTPAVRQRVIEEAKTAFLLNIQLFEELQELLTHDTKDQSPSRAPGLRQRASNKVQDSAPVETPRGKPPLNTRSQAPLLRWVLTLSFLVATVAVGLYAM
2DY5 Chain:A ((10-223))---------SQDLSEALKEATKEVHIRAENSEFMRNFQKGQVSREGFKLVMASLYHIYTALEEEIERNKQNPVYAPLYFPEELHRRAALEQDMAFWYGPHWQEAIPYTPATQHYVKRLHEVGGTHPELLVAHAYTRYLGDLSGGQVLKKIAQKAMALPSSGEGLAFFTFPSIDNPTKFKQLYRARMNTLEMTPEVKHRVTEEAKTAFLLNIELFEELQALLTE-----------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2DY5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97765 for 1642 contacts (-59.5/contact) +
2D Compatibility (PS) -23704 + (NN) -21060 + (LL) 4096
1D Compatibility (HY) -26000 + (ID) 9000
Total energy: -173433.0 ( -105.62 by residue)
QMean score : 0.603

(partial model without unconserved sides chains):
PDB file : Tito_2DY5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DY5-query.scw
PDB file : Tito_Scwrl_2DY5.pdb: