Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATPPKRFCPSPSTSSEGTRIKKISIEGNIAAGKSTFVNILKQASEDWEVVPEPVARWCNVQSTQEEFEELTTSQKSGGNVLQMMYEKPERWSFTFQSYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESDCMNETEWTIYQDWHDWMNSQFGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTSFDYLQEVPVLTLDVNEDFKDKHESLVEKVKEFLSTL
2A30 Chain:D ((23-248))
-------------------RIKKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQST---------------NVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNG------KPVLFFERSVYSDRYIFASNLYESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNE-----YESLVEKVKEFLSTL
General information:
TITO was launched using:
RESULT:
Template:
2A30.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103703 for 1646 contacts (-63.0/contact) +
2D Compatibility (PS) -23066 + (NN) -9360 + (LL) 1436
1D Compatibility (HY) -33600 + (ID) 10200
Total energy: -178493.0 ( -108.44 by residue)
QMean score : 0.594
(partial model without unconserved sides chains):
PDB file :
Tito_2A30.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A30-query.scw
PDB file :
Tito_Scwrl_2A30.pdb
: