Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVVFNGLLKIKICEAVSLKPTAWSLRHAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNGRKIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEPEGRVYVIIDLSGSSGEAPKDNEERVFRERMRPRKRQGAVRRRVHQVNGHKFMATYLRQPTYCSHCRDFIWGVIGKQGYQCQVCTCVVHKRCHELIITKCAGLKKQETPDQVGSQRFSVNMPHKFGIHNYKVPTFCDHCGSLLWGLLRQGLQCKVCKMNVHRRCETNVAPNCGVDARGIAKVLADLGVTPDKITNSGQRRKKLIAGAESPQPASGSSPSEEDRSKSAPTSPCDQEIKELENNIRKALSFDNRGEEHRAASSPDGQLMSPGENGEVRQGQAKRLGLDEFNFIKVLGKG-SFGKVMLAELKGK-DEVYAVKVLKKDVILQDDDVDCTMTEKRILALARK-HPYLTQLYCCFQTKDRLFFVMEYVNGGDLMFQIQR-SRKFDEPRSRFYAAEVTSALMFLH-QHGVIYRDLKLDNILLD-AEGHCKLADFGMCKE---GILNGVTTTTFCGTPDYIAPEILQE---LEYGPSVDWWALGVLMYEMMAG-QPPF---EADNEDDLFESILHD------DVLYPVWLSKEAVSILKAFMTKNPHKRLGCVASQNGEDAIKQHPFFKEID---WVLLEQKKIKPPFKPRIKTKRDVNNFDQDFTRE-EPVLTLVDEAIVKQINQEEFKGFSYFGEDLMP |
| 1CDK Chain:A ((8-350)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGSEQESVKEFLAKAKEDFLKKWENPAQNTA------H--LDQFERIKTLGT-GSFGRVMLVKHKETG-NHFAMKILDKQKVVKLKQIEHTLNEKRILQAV--NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHS-LDLIYRDLKPENLLIDQ-QGYIQVTDFGFAKRVKG-RT-----WTLCGTPEYLAPEIILSKGY---NKAVDWWALGVLIYEMAAGY-PPFFAD---QPIQIYEKIVSGKVRFPS------HFSSDLKDLLRNLLQVDLTKRFG--NLKDGVNDIKNHKWFA---TTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSI--------NEKCGKEFSEF--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CDK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151159 for 2512 contacts (-60.2/contact) +
2D Compatibility (PS) -34122 + (NN) -11666 + (LL) 24600
1D Compatibility (HY) -25600 + (ID) 5850
Total energy: -203797.0 ( -81.13 by residue)
QMean score : 0.521
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