Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAAPSPSGGGGSGGGSGSGTPGPVGSPAPGHPAVSSMQGKRKALKLNFANPPFKSTARFTLNPNPTGVQNPHIERLRTHSIESSGKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME----------LMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVACYVCKILDQMPATPSSPMYVD |
3GGF Chain:B ((23-292)) | ---------------------------------------------------------------------------------------------------ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEI-TVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQ--IATMLKEIL-------------KGLDYLHSEKKI-HRDIKAANVLLSEQGDVKLADFGVA---------NTFVGTPFWMAPEVIQQSA----YDSKADIWSLGITAIELAKGEPPNSDMHPM-RVLFLIPKNNPPTLVG----DFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKK----TSYLTELIDRFKRWKAE----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3GGF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -142368 for 1882 contacts (-75.6/contact) +
2D Compatibility (PS) -25974 + (NN) -8715 + (LL) 4044
1D Compatibility (HY) -20000 + (ID) 4750
Total energy: -197763.0 ( -105.08 by residue)
QMean score : 0.382
|
|
|