Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEFKSIRNIAIIAHVDHGKTTLLDNMLKQSGTFRENQE----VQERVMDSGNQERERGITILAKCTSIMWGDEKINIIDTPGHADFGGEVERVLCMVDGVLLLVDAAEGPMPQTKFVLSKALKADLKSIVIINKVDRPDSRIDEVLNEIYELFFNLDA--------------------------------------------T---------------------------------NEQLDFPVLYASGRNGWCIKELSDKRKDLSPLFSTVIDYIKPANYD---------RNAPFAMLVTLLESD--KFLGRILTGKIYQGIAKVNSDLKVLDLDGKVIKRGRLTKLLSFSGLKRIPVEQAVAGDIIAIAGLEKASVSATIVAPEVTTAISSTPVDPPTMAITLSVNDSPFAGQEGTKLTSAIIKDRLYAEAEINVAITVTPTPNDEAFEVGGRGELQLGVLIENMRRE-GFELSVSRPRVL-FKEEGGKKLEPIEEVVIDVDDEYSGIIMKKLSFRKGEVTDMRPSGSGRTRLIFLVPSRGLIGYQGEFLTDSRGTGIINRLFHSYAPYKGPISRRRNGVLISTDKGEAVAYAIFNLQDRGIMFIKPQDRVYCGMVVGQHSRDNDLEINVLKGKQLTNVRAAGSDEAIKLTPPKTMTLEDMIAYIDDDELVEVTPKSIRLRKKFLDPNERRRAEKAKNKE |
| 3TR5 Chain:A ((8-514)) | -KQTAMRRTFAIISHPDAGKTTLTEKLLLFGGAIQLAGTIKSR--HATSDWMELEKQRGISVTTSVMQFPYKDYLINLLDTPGHADFTEDTYRTLTAVDSALMVIDAAKGVEPRTIKLMEVCRLRHTPIMTFINKMDRDTRPSIELLDEIESILRIHCAPVTWPIGMGKYFKGIYHLIEDAIYLYQPGKHERVGESERIEGINNPELDKKLGDLASELRNEIELVKGASHPFEREGYLKGELTPIFFGSAINN----------FGVGELLDAFVKEAPPPQGRETNSRLVKPEEEKFSGFVFKIQANMDGHRDRIAFLRIASGQYQKGMKAYHVRLK---KEIQ-INNALTFMAGKRENAEEAWPGDIIGLHNHGTIQIGDTFTQGE-RFKFTGIPNFASELFRLVRLKDP---------LKQKALLKGLTQLSEEGATQLFRP-LDSNELILGAVGLLQFDVVAYRLENEYNVKCVYESVNVVTARW------------VICDD----KAVLERFNQE--QSRNLAYD--GGGHLTYLAPSRVNLEITMEKWPEIQFSETREH------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TR5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -147873 for 3350 contacts (-44.1/contact) +
2D Compatibility (PS) -43650 + (NN) -10735 + (LL) 11068
1D Compatibility (HY) -11600 + (ID) 4800
Total energy: -207590.0 ( -61.97 by residue)
QMean score : 0.449
|
|
|