Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRIPFLLILIIVIASLPVINNWLSYHNQTLNDDYIGERLDNYISRNFDKII--KILREESIKSNY--AARDNATKGKILQYENKIFDLAYPYL-GNENSNIIAVGFFDYSCGYCKAIKDDIKQLIND-----GKIKYIFRDTPILGNNSLKAAKSALAVYFIDKGKYFDFHYAILDHKGEFSD------ENILDIVKSIGI-NEDNFNNSMKNNAGKIEQMINDSKFLVRELGAGGTPFLIIGDSLFIGATDLDVLRKKVDELSHKQN-------- |
4PWO Chain:A ((1-250)) | ---------------------TQAEKTATDLPPGFSGKAGSVNATPGTKGLDGPTPLADGSFDATIFGPAKELKSADDILNVHRR--NAKDPFAVGAVDAPLVITEFSDFECPFCARWSNQTEPTLMEEYVSKGLVRIEWNDLPVNGEHALAAAKAGRAAAA--QGKFDEFRKALFEASRNVSGHPNNTLKDFERFARNAGVKDMERFSREAQDS--TYDEVLAKAADYAHGLGVSGTPAFVVGTQYISGAQPTEEFIKVIESELKKSPTFSTPSSH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PWO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49566 for 1738 contacts (-28.5/contact) +
2D Compatibility (PS) -24107 + (NN) -12448 + (LL) 2916
1D Compatibility (HY) -3600 + (ID) 1950
Total energy: -88755.0 ( -51.07 by residue)
QMean score : 0.472
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