Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTSAIFFSEGSYIVIMNNIIVKKFGGTSLTDL---TRVANLIKKDVDKGYRIIVVVSAIAGLTDQ-------MVFQARQTLNL------------------S-----------------HKQALSEYDVMLSAGEQISCGLLAITLLSIGVNAKSWLAWQLPIITDNSYSESKIK-TIKIDHLKRSFAEGYTVAIIAGFQGIYD-DRITTFGRGGSDISAVALAVAFGVRVCEIFTDIDGIYTADPKIVPKARKLKSISYDEMLEMSSSGAKILHNRSVQLAMKHNIKVQVLSTFK-EVEGTAVLHENDV-LERHTITGITYSTNEALITFTNFAN------TLRTLKDMAGANIKIDMIHGS----SIVISEFDIDLMKE-LLNKNE-----DYV-INNNAAKISIIGIGV------MSVMYHTLKFFSEKKIEILAI--TASEIKISIIVQRECAEALVRDLHTELMCTEGG |
| 3TVI Chain:A ((4-438)) | -------------------IVVTKFGGSSLADSNQFKKVKGIIDSD---ANRKYIIPSAPGKRTNKDYKITDLLYLCNAHVKNGIPFDDVFKLISQRYTEIVSELNIDMDIAYYLEKVKKNIENGASSDYAASRGEYLNGVILAKYLNAEFID-----AAEV-IFFDK-----CFDEKKSYEKIKEKVLSC-NKAVIPGFYGSSFNGDVKTFSRGGSDVTGSIISAGVNADLYENWTDVSGFLMADPRIVENPKTISKISYKELRELSYM----LHEEAIFPVKDSGIPINIKNTNKPSDPGTLILSDTHKEINLGTITGIAGKKNFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMPSGVDSVSLVIEDCKLDGKCDKIIEEIKKQCNPDSIEIHPNMALVATVGTGMAKTKGIANKIFTAL---SKENVNIRMIDQGSSEINVIVGVETVDFEKAVKSIYNAFN----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TVI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -263349 for 2819 contacts (-93.4/contact) +
2D Compatibility (PS) -38041 + (NN) -15982 + (LL) 2624
1D Compatibility (HY) -17200 + (ID) 4600
Total energy: -336548.0 ( -119.39 by residue)
QMean score : 0.444
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