Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAISLLQGKKGLITGIINKRSIAYGIVKTLSEHGAESAVTYQNEIVKERLLSIAAELNVELVLNCDVANEGTIDDVFKSIEEKWGTLDFLVHAIAFSDKNELSGKYVN-TSLNNFQNAMNISCYSFTALAQRAEKMMPNGGSLLTLSYYGAEKVMPNYNVMGLCKAALEASVKYLACDLGPQNIRVNAISAGPIRTLASSGISDFHFISEWNRNNSPLRRNTTLEDVGKAALYLLSDLSSGTTGEILHVDSGYNVVGMKAIDSNIINSYQN
1DFI Chain:D ((2-257))
----FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTL----------MLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMNE-----------
General information:
TITO was launched using:
RESULT:
Template:
1DFI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148046 for 2059 contacts (-71.9/contact) +
2D Compatibility (PS) -26298 + (NN) -7221 + (LL) 1304
1D Compatibility (HY) -23600 + (ID) 5950
Total energy: -209811.0 ( -101.90 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_1DFI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DFI-query.scw
PDB file :
Tito_Scwrl_1DFI.pdb
: