Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQLSKYKNQSVAVFGLGKTGLSVINVLIKSGAKAYAWDDSKEQMANAKTMYKECNFIHPKKYDWHEIKALILSPGVPISYPKPHWIVKLARSFDCKIKSDIELFLEAKA-KNQKIVGVTGTNGKSTTTSLIGHILKSAGKKVAIGGNL----GVPILDLE--KDAEIYVIEISSFQLELINMPAVIPVHDHTFFSGSQYRAAWMIKRVSEMTKKMTEVTKRMAGMIKVDISVLLNITLDHIDRHGSMENYIAVKSKLIGGS---KVAVIGCDNEITADIFNKFTGNKIPISGVRSLLDDKKGAE-----IQEISLKLEN-HNLSASDAKINLTSNAENIAASCAVCKLLKVDSSTIIDGIKSFSGLKHRNELLGKIENVLFVNDSKATNAESSKKAILSYK----NIYWIVGGRSKEG-----GIESLSKHF-A-RIRKALLIGESTEVFASTMENKVDYVRCCNLEDAFRLAFEEAIKS--KEKTTILLSPACASFDQWRNFEERGEAFCRMFEKLRDSFTITRVV |
| 1GG4 Chain:A ((60-447)) | ----------------------------------------------------------------GGAGALLVSRPLDIDLPQ--LIVKDTR----LAFGE--LAAWVRQQVPARVVALTGSSGKTSVKEMTAAILSQCGNTLYTAGNLNNDIGVPMTLLRLTPEYDYAVIELGANHQGEI---------------------------------------AWTVSLTRPEAALVNNLA--------SLAGVAKAKGEIFSGLPENGIAIMNADNNDWLNWQSVIGSRKVWRFSPNAAN-SDFTATNIHVTSHGTEFTLQTPTGSVDVLLPLPGRHNIANALAAAALSMSVGATLDAIKAGLANLKAVPGRLFPIQLAENQLLLDDSYNANVGSMTAAVQVLAEMPGYRVLVVGDMAELGAESEACHVQVGEAAKAAGIDRVLSVGKQSHAISTASG---VGEHFADKTALITRLKL---LIAEQQVITILVKGS------------RSAAMEEVVRALQ--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GG4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 21804 for 2692 contacts (8.1/contact) +
2D Compatibility (PS) -35636 + (NN) 8245 + (LL) 10508
1D Compatibility (HY) 14400 + (ID) 1800
Total energy: 17521.0 ( 6.51 by residue)
QMean score : 0.096
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