Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSNLWKKGTDFLGSEFAIMGGAMSWVSERNLVSAISNAGGFGVIACGA-MSSDLLEKEIIETQKLTNKPFGVNLITMHP----NLSELIDVCIETKVSHIVLAGGLPVKPNIEKIKNVGIEVMCFAPSLSLAKRLVKMGVDALIIEGMEAGGHIGP--VSTSVLSQEILPYFKDERVPVFVAGGIGRGEMIVNYLEMGASGCQIGTLFVCTNESIAHKNFKEVFIKSAARDAISSVQISADFPVIPVRAIANKASDDFMQYQKEIIDKYHKGQISKEDGQLEIEKFWAGA-LRGAVIEGDIETGSLMAGQSVGMVDKEKPVKEVIDILIQQASNYIESKSVKVGDLIISKASS |
| 2GJL Chain:A ((3-320)) | ---VFRTRFTETFGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGNDP-GEHIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRLR---VPIIASGGFADGRGLVAALALGADAINMGTRFLATRECPIHPAVKAAIRAADERSTDLI----MRSLRNTARVARNAISQEVLAIEARGGAGY-----------ADIAALVSGQRGRQVYQQGDTDLGIWSAGMVQGLIDDEPACAELLRDIVEQARQLVRQRLEGMLA-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GJL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -247990 for 2812 contacts (-88.2/contact) +
2D Compatibility (PS) -32575 + (NN) -5433 + (LL) 1988
1D Compatibility (HY) -8800 + (ID) 4150
Total energy: -296960.0 ( -105.60 by residue)
QMean score : 0.541
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