Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAETTKIFESHLVKQALKDSVLKLYPVYMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDG--SYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG---LATVDESAITGESAPVIKESGG----------DFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTIIFLVVILTMYP--LAKFL------NF----NLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKSSS------------------------------------FERLVKAAYESSIA-------------DDTPEGRSIVKLAYKQHIDL---------------------PQEVGEYIPFTAETRMSGVKFT---------T-REVYKGAPNSMVKRVKEA--GG-------HIPVDLDALVKGVS--KKGGTPLVVLE-----------------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR-------------------------------FVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFMAAMPAMNHLNIMHLHSPESAVLSALIFNALIIVLLIPIAM--K-----GVKFKGA-STQTILMKNMLVYGLGGMIVPFIGIKLIDLIIQLFV |
| 3AR4 Chain:A ((33-835)) | -KRHLEKYGHNELPAEEGKSLWELV-IEQFEDLLVRILLLAACISFVLAWFEE--G---EETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEM-GKVYRA-DRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFL------------TAALGLPEALI-PVQLLWVNLVTDGLPA-TALGFNPPDLDIMDRPPRSPKEPLISGWLF------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AR4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42877 for 4982 contacts (-8.6/contact) +
2D Compatibility (PS) -65036 + (NN) -4540 + (LL) 4336
1D Compatibility (HY) 26800 + (ID) 2350
Total energy: -83667.0 ( -16.79 by residue)
QMean score : 0.081
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