Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKNILITGVHGYIGNALKDKLIEQ-GH-QVDQINVRNQ------------------LWKSTS--FKDYDVLIHTAALVHNNSPQARLSDYMQVNMLLTKQLAQKAKAEDVKQFIFMSTMAVYGKEGQVGKSDQIDTQTPMNPTTNYGISKKFAEQALQELISD-SFKVAIVRPPMIYGAHCPGN-------FQRLMQLSK--RLPIIPNINNQRSALYIKHLTAFIDQLISLE-----VTGVYHPQDSFYFDTSSVMYEIRRQSHRKTVLINMPSVLNKYFNKLSVFRKLFGNLTYSNTLYENNNALEVIPGKMS-LVIADIMDETTTKDKA |
| 2YY7 Chain:A ((1-310)) | MNPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALLSAT-AEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKE---NTPQYTIMEPSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAAM-SFTPTEIANEIKKHIPE-FTITYEPDF----------RQKIADSWPASIDDSQAREDWDWKHTFDLESMTKDMIEH------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -111636 for 2252 contacts (-49.6/contact) +
2D Compatibility (PS) -29445 + (NN) -13265 + (LL) 1188
1D Compatibility (HY) -8000 + (ID) 2500
Total energy: -163658.0 ( -72.67 by residue)
QMean score : 0.495
|
|
|