Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYRYKPLLQSIHLPNGIKISNRFVLSPMTVNASTKEGYITKADLAYAARRSN-SAGMQVTGAAYIEPYGKLFEYGFNIDHDACIPGLTNMASTMKQHGSLAIIQLAHAGRFSNQAILNFGKVYGPSPMTLHSPIEHVVIAMSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQ-H-ADMVGMSSPFVTEPDFVHKLAEQRPHDINLEFSMADLEDLAIPHAAFKDIVKMMDYGEGLKKHTRDALRQLEQNYHDSSS |
| 3KRU Chain:A ((2-325)) | ----SILHMPLKI-KDITIKNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITDHDLGIWNDEQVKELKKIVDICKANGAVMGIQLAHAGRKCNISY---EDVVGPSPIKAG-DRYKLPRELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGN-SIENRARFLIEVIDEVRKNW----PENKPIFVRVSADDYME--GGINIDMMVEYINMIK--DKVDLIDVSSGGLLNVDI--NLYPGYQV-KYAETIKKRC--NIKTSAVGLITTQELAEEILSNERADLVALGRELLRNPYWVLHTYTSKE------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240859 for 2881 contacts (-83.6/contact) +
2D Compatibility (PS) -33696 + (NN) -9097 + (LL) 4524
1D Compatibility (HY) -19600 + (ID) 4400
Total energy: -303128.0 ( -105.22 by residue)
QMean score : 0.497
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