Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNYGIPQNAIITIAGTVGVGKSTLTQALADKL-NFKTSFENVEHN---------PYLDKFYSDFERWSFHLQIYFLAERFKEQK------------RMFEYGGGFVQDRSIYEDVDIFAKMHEEEGTMSKEDFKTYSDLFNAMVM---TPYFPKPDVMIYLECNYDEVIDRIIERGREMEINTDPEYWKKLFKRYDDWINSF---------NACPVVRININEYDIHKDPESLNPMIDKIARIIQTYRQVDTR |
| 1P5Z Chain:B ((23-261)) | -------RIKKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSTNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASN-LYE-----SECMNETEWTIYQDWHDWMNNQFGQ--SLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNE-DFKD---KYESLVEKVKEFLS-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P5Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98441 for 1438 contacts (-68.5/contact) +
2D Compatibility (PS) -20805 + (NN) -5805 + (LL) 1044
1D Compatibility (HY) -15200 + (ID) 2400
Total energy: -141607.0 ( -98.47 by residue)
QMean score : 0.566
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