Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENFV---------THAKNGYYDGITFHRVINDFMIQGGDPT-ATGMGGESIYGGAFEDEFSLNAFNLY----GALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE
1QNH Chain:A ((14-148))
--------------------NSNAGRIIFELFSDITPRTCENFRALCTGEKIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSGGESIYGRSFTDE----NFNMKHDQPGLLSMANAGPNTNSSQFLITL---VP-------------------------CPWLDGKHVVFGKVIEGMNVVREM------------------------
General information:
TITO was launched using:
RESULT:
Template:
1QNH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30242 for 846 contacts (-35.7/contact) +
2D Compatibility (PS) -12697 + (NN) -5382 + (LL) 4392
1D Compatibility (HY) -10800 + (ID) 3300
Total energy: -58029.0 ( -68.59 by residue)
QMean score : 0.443
(partial model without unconserved sides chains):
PDB file :
Tito_1QNH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QNH-query.scw
PDB file :
Tito_Scwrl_1QNH.pdb
: