Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFDRHRRLRSSATMRDMV-RENHVRKEDLIYPIFVVEKDDVKKEIKSLPGVYQISLNLLESELKEAYDLGIRAIMFFGVPNSKDDIGTGAYIHDGVIQQATRIAKKMYDDLLIVADTCLCEYTDHGHCGVIDDHTHDVDNDKSLPLLVKTAISQVEAGADIIAPSNMMDGFVAEIRRGLDEAGYYN-IPIMSYGVKYASSFFGPFRDAADSAPSFGDRKTYQMDPANRLEALRELESDLKEGCDMMIVKPALSYLDIVRDVKNHT-NVPVVAYNVSGEYSMTKAAAQNGWIDEERVVMEQMVSMKRAGADMIITYFAKDICRYLDK |
| 1PV8 Chain:A ((11-329)) | ---------YLHPLLRAWQTATTTLNASNLIYPIFVTDVPDDIQPITSLPGVARYGVKRLEEMLRPLVEEGLRCVLIFGVP------------EESPAIEAIHLLRKTFPNLLVACDVCLC----------------AFRAEESRQRLAEVALAYAKAGCQVVAPSD--DGRVEAIKEALMAHGLGNRVSVMSYSAKFASCFYGPFRDAA-------------LPPGARGLALRAVDRDVREGADMLMVKPGMPYLDIVREVKDKHPDLPLAVYHVSGEFAMLWHGAQAGAFDLKAAVLEAMTAFRRAGADIIITYYTPQLLQWLKE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188045 for 2227 contacts (-84.4/contact) +
2D Compatibility (PS) -30486 + (NN) -12233 + (LL) 1960
1D Compatibility (HY) -23600 + (ID) 5300
Total energy: -257704.0 ( -115.72 by residue)
QMean score : 0.593
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