Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------MDTKQLKQDIID-----YAYTIGIDSIGFTTADPFDELKQKLEAYHANGYASGFEESDIALRTEPKLSLPTARSIIAIAVGYPN------KLKGAPKSVRGDRR-----GLFARASWGQDYHTIMRKRLDMLAAFIESKVPD----------------VEIKSMVDTG----------------VLSDRAV-----AERAGLGFVGRNGFVINPKLGTW-TYLGEMLVSIPFEPDDPLLD---------------------SCGDCTI----CVDRCPTSALVGNGQLNSQKCISF--LTQTKGYMPDQYR---YKIGNRLYGCDTCQ-------------------------QVCPKNRGINTEQDD-IILEPEI-------------------------------LKPRLVPLLRMS-NKEFKQTYGHLAGAWRGKKPIQR------NAILALAHFNEV----------DAIPELKKVATTDERPMIRATAYWAIGQILGEEARDFINANYDQEDAEVQNEMIKGLDTRRE |
| 4QEI Chain:A ((1-617)) | IVDRAKMGDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGERFRADHLLKAHLQKLQQELADLFVNFNLMFKTFIGPGGNMPGYLRPETAQGIFLNFKRLLEFN---QGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFIGRIYLYLTKVGISPDKLRFRQHMEDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPLVAEKPLKEPKTVNVVQFEPSKGAIGKAYKKDAKLVMEYLAICDECYITEMEMLLNEKGEFTIETQLTKDMINVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRHGVSHKVDDSSGSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMR--QIRAEISELPSIVQDLANGNITWADVEARYPLFEGQETGKK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4QEI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -27052 for 2171 contacts (-12.5/contact) +
2D Compatibility (PS) -38481 + (NN) -1877 + (LL) 660
1D Compatibility (HY) -12400 + (ID) 4100
Total energy: -83250.0 ( -38.35 by residue)
QMean score : 0.106
|
|
|