Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKSINHICFSVRNLNDSIHFYRDIL-LGKLLLTGKKT----AYFELAGLWIALNEEKDIPRNEIHFSYTHIAFTIDDSEFKYWHQRLKDNNVNILEGRVRDIRDRQSIYFTDPDGHKLELHTGTLENRLNYYKEAKPHMTFYK
2P7K Chain:B ((1-128))
MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYS-----LSKEKFFLIAGLWICIMEGDSLQER----TYNHIAFQIQSEEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGTLEERL--------------
General information:
TITO was launched using:
RESULT:
Template:
2P7K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60754 for 744 contacts (-81.7/contact) +
2D Compatibility (PS) -12199 + (NN) -1300 + (LL) 1476
1D Compatibility (HY) -11600 + (ID) 2150
Total energy: -86527.0 ( -116.30 by residue)
QMean score : 0.479
(partial model without unconserved sides chains):
PDB file :
Tito_2P7K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P7K-query.scw
PDB file :
Tito_Scwrl_2P7K.pdb
: