Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQIKALALFSGGLDSLLSMKLLIDQ-GIEVTALHFNIGFGGNKDKREYFENATAQIGAKLLVCDIREQFFNDVLFKPKYGYGKYFNPCIDCHANMFRNAFYKMLELDADFVLSGEVLGQRPKSQRKEALNQVRKLVREVGEEARFDLILDRTQASGEKPQFLDELLLRPMSAKLLEPTFMEKKGWVDREKLLDVSGRGRARQLQMIKDYGLKY---YEKP-GGGCLLTDIQVSNKIKNLKEYREMVFEDGVIVKNGRYFVLPHNARLVVARNEEENHKLDIEHPLMDKIELLGCKGPLSLVDKNASQEDKELAGRIALGYAKTLKNQAYLIQIGNEKRELYPLDKENAREYLFA |
3TQI Chain:A ((227-409)) | --KEQVIVGLSGGVDSAVTATLVHKAIGDQLVCVLVDTGLLRLNEVDEVLNVFQKHLGAKVICVDAKDRFMKALKG-I----SDPEEKRKIAGEQFIRVFEEQAKKLNVKWLGQGTIYPDV--IES---------------------------------------KLIEPLREL------------------------FKDEVRKLGLELGLPADLIYRHPFPGPGLAIRILGEVSAEYINILKQADAIFIEELKKSDYYHQVSQAFAVFMPLKSVYGYIIALRAVKQWADLPHEFLSKVSHRIVNEIKEVSRVVYDMTNKPPATIEW--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TQI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76024 for 1105 contacts (-68.8/contact) +
2D Compatibility (PS) -16690 + (NN) -6426 + (LL) 7360
1D Compatibility (HY) -3600 + (ID) 1250
Total energy: -96630.0 ( -87.45 by residue)
QMean score : 0.376
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