Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIKNVLLSGGSGKRLWPLSRSLYPKQFLKLF-DHKSLFELSFKRNASL-VDETLIVCNEKHYFLALEEIKNEIKNK--SVGF--L---L--ESLSKNTANAIALSALMSDK--EDLLIVTPSDHLIKDFQAYENAIKKAINLAQKGFLVTFGISIE--KPNTEFGYIESPNGLDVKRFIEKPSLEKAIE------FQ-------KSGGFYFNSGMFVFQAGVFLDELKKHAPTILKGCERAFESLENTHFFEQKIARLSEKSMQDLEDMSIDIALMQQSHKIKMVELNAKWSDLGNFNALFEEAANGTKENVSLNQTPIFAKESTNNLVFSHKVSALLGVEDLAIIDTKDALLVAHKDKAKDLKALVSEIETHNQELLQTHTKVYRPWGSYEVLHESGCYKVKILEVKPNARLSLQKHFHRSEHWVVISGMASVELDHQSFELQANESTYIPKNTLHRLANYGKIPLIIIEVQVGEYVGEDDIVRVDDDFNRQNQNA |
| 1YP2 Chain:A ((20-295)) | -SVLGIIL------RLYPLTK-KRAKPAVPLGAN-YRLIDIPVSNCLNSNISKIYVLTQFN-SASLNRHLSRAYA--EGFVEVLAAQQSPENPDWFQGTADAVRQYLWLFEEHTVLEYLILAGDHLYRMD--YEKFIQAHRE---TDADITVAALPMDEKRATAFGLMKIDEEGRIIEFAEKPQGEQLQAMKVDTTILGLDDKRAKEMPFIASMGIYVISKDVMLNLLRDKFPGAN---------------------DFGSEVIPG---------ATSLGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKNCHIKRAIIDKNARIGDNVKIINKDNVQEAARETDGYFIKSGIVTVIKDALIPSGIII--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YP2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104337 for 1837 contacts (-56.8/contact) +
2D Compatibility (PS) -25424 + (NN) -8013 + (LL) 5264
1D Compatibility (HY) -12000 + (ID) 2050
Total energy: -146560.0 ( -79.78 by residue)
QMean score : 0.456
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