Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVLEVKNLSFKYSQ---KLILDKLSFSVPKNSITSILAPNGSGKTTLLKCLLGLLKPLEETEIKACNKDILPLKPYEKAKLIAYIPQVEYYAFNFSVLDFVLMGKATHLNLFAMPKAKHIKEATSVLERLDLESL-----------KDQGINDLSGGQRQMVLLARSLLQRTPLLLLDEPTSALDLKNQALFFDAIKDEMKKRELSVLVNIHDPNLVARHSTHVVMLKDKKLFLQASTPIAMTSHNLSALYDTPLEAIWHDDKLVVYAL |
3ZDQ Chain:A ((341-572)) | -ALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPAS-GTISLDGHDIRQLNPVWLRSKIGTVSQEPI-LFSCSIAENIAYGADDPSS-------VTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLM--DGRTVLVIAHRLSTI-KNANMVAVLDQGKITEYGKHEELLSKP------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109501 for 1716 contacts (-63.8/contact) +
2D Compatibility (PS) -22790 + (NN) -3037 + (LL) 3432
1D Compatibility (HY) -11600 + (ID) 3350
Total energy: -146846.0 ( -85.57 by residue)
QMean score : 0.410
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