Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MERSSDEDLSHQDPSLFIESREQGGTRGVYRSSDQQAVSEESHRERDRIHEHVSRGDGVSARADARANSNGASSPASRMENGARSEEKGDNPSDERGIPQTPQSPSHQQNSSRDLGLSLSREQPGQTGRLRLFDHGQMGSLFPTDHENQRKRSDNELDRRSDKANENGDKSPRQNGSANQESARSERYGIAQGSSNQSVLLPAQSRLHHAGLSAQNGLRDLEENRDQEGRLLSNLDNLESLLNAIRNNTIASEPDFRSRLLEAIQNNDPLKDSIVGAQLLKDPTTKIFYDKFQLKISPKKVLEILENRLKKSIETTNETLNAFNVLDSQAIDLNAISNSVGLNPTQESKITDNSVELNNAQEQTAQEQTTQEQTTQEQTTQEQTTQEQTTQEQTTQEQTTQEQDTQENAPTTIKQETPITPAIPLNPKIDFKPSEEVLIKGAKTRYKANIKAIELLKELQAKQEILKGDYYATLKEQEILAQFSGWGGLESYFKKAQHPEEFKELNALLTKDEFRRAYLSARDAYYTPKLVIDSIYQGLDQLGFNNDNHPKEIFEPSLGTGKFIAHAPSDKNYRFIGTELDPISANLSKFLYPNQVIQNTALENYQFYQEYDAFVGNPPYGNHKIYSSNDKELSNESIHNYFLGKAIKELKDDGIGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRLPNSVFKATGAEVTSDIVFFKKGVEKATNQSFTKAMPYYDKILNSLDDDTLFALQNNRFDSFIPSDQLKIVNAVANHFGFKQEKLQRWYEKIDTANFGYSTQDYKIIKDFIDKVGKNSINLNEQTLNEYFIHHPENILGHLSLEKTRYRFETNGEQIYKYDLQALEDESLD---LSQALKQAIEKLPKDVYQYHKTTLKTDVLIIDSSNERYQEVQKLIKNLERRELVKWDNLYFQLEQNNEMGIFLKPTKINSKVQDSRLKAYFKIKDALNDLTSAELNPLSSDLELENKRAKLNLVYDEFVKKFGYLNENKNRKDIRQDLYGAKVLGLEKDFEKEITPRSAKMQNIEPRQAQAKKAQIFFERTLNPKKELIITNAKEALIASINQKGGLDLHFIRDHFTTQSLETTIKELLEQKLIYKDHKDNGGYILANDYLS--GNVKRKLKEVKEAINQGVEGLEANVKDLELIIPK---DLKATEIMANINSPWIP-TQYLEEFLMELSANHYEKQYGDKMTDYQLSNLKEDIKIEHLSGAYEVFVRNNELNELYGIRHKDKPHSYKV--PFESLLNKVL----NNKDLSVKYAQVDPNDP--KKEIFITDEEQSNLARQKAEELKEAFKDWIYKDYSRRTHLEQIYNDTFNNSVLKTYDGSQLELEGFNYHISLRPHQKNAIFRTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNANVLVVDSKDTTEKERELLFNQIANNNYDAVVIAHTHLELLSNPRGIIEELKEEELVNAEKNFERQELAYKNNPRETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVDEAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIMFLTGTPIANSLSEMYHLQRYLTPDVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTMYRAFADIVSNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVALENGKYNEGSIIDRMQKCEGKKSQKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAKNIYENYLETHATKGTQLGFIGLSTPKTHSQKVSLEALDNAHETENKNPLDKAQELLESLSSYDEKGNLIAPSKKELENELKEKEAKSVNLDEEIAKGCSFDVYSDVLRHLVQMGIPQNEIAFIHDAKTEEQKQDLFKKLNRGGVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNMGSSNASEMKAEATGNPLIIEEVKLRAEIKSEESKYKAFNKEHYFNEESLKNNASKLDYLKQELKDLETLQRSVIIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELTHKKLKEQNKQIAEQNKEKLDAIKKQFASNLNTLFVNEEEDYKLLEYKGFVVNAYKTKYQVEFSLSPKDIPNIAYSLAIWFIKTILSTCLALIISALRSSLMGF |
| 4M59 Chain:A ((6-714)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PDAQVLVLAISSHPLPTLAAFLASRRDELLRADITSLLKALELSGH--WEWALALLRWAGKEGAADASALEMVVRALGREGQHDAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACSRDGLVDEAVAFFEDLKARGHAPSVVTYNALLQVFGKAGNYTEAL----RVLGEMEQNGCQPD------AVTYN---ELAGTEEAARCLDTMASPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVSGKRGMEDYVTRVLEGMRSSGVELSRDTYNTLIAAYGRCGSRTNAFKMYN-EMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNP--------DLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGL--VKEAQRVLSEMVADGMAPC------------AVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAFEEARGFLSE--VKALEAYIEDA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M59.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 109392 for 5303 contacts (20.6/contact) +
2D Compatibility (PS) -69843 + (NN) -12844 + (LL) 97488
1D Compatibility (HY) -17600 + (ID) 4600
Total energy: 101993.0 ( 19.23 by residue)
QMean score : 0.214
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