Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQTLFKEITSKCYVNGNEMKENSSNVLDQYFTKPSVALKCFQKACEVIKKYENPDDFIFLEPSAGDGVFYD------------------LFPKDRRIGIDIEPK---------RDGFIQCDFLN------------------------YKLPVHQK----------VICLGNPPFGH-------------RG-------VMALEFINHARNCDFVCFILPM-FFESQGKGSIKYRVKGLNLLYSERLEKNAFID---------FKNKEVDVHCVFQIWSKK-----YQNKKSEFSWYKNR------------HKEPFSEYIKVFTVSLAKNRECGKEWIFNQKA---------SFYISSTFY--KSTQIVE-NFEEVKY-QSGIAVVFTSADKVLN-------------AKLKKLFQEIDWT-------KYASLA-TNSCYHLGKSHIFQALHDHLDSLKGN------------------ |
1ZR6 Chain:A ((3-481)) | -EAEFNSINACLAAADVEFHEEDSEGWDMDGTAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISAKGGGHSYGSYGFGGEDGHLMLELDRMYRVSVDDNNVATIQGGARLGYTALELLDQGNRALSHGTCPAVGVGGHVLGGGYGFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGGGGGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQHVAGLKALQDWAQNTMPRELSMRLEINANALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETDWYGQINTYLYGADLNITYNYDVHEYFYANSLTAPRLSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSALAAVSNDETAYAHRDQLWLWQFYDSIYDYENNTSPYPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLTKEEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPIAY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZR6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29503 for 2221 contacts (-13.3/contact) +
2D Compatibility (PS) -32753 + (NN) 6240 + (LL) 208
1D Compatibility (HY) -9200 + (ID) 2750
Total energy: -67758.0 ( -30.51 by residue)
QMean score : 0.077
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