Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKIELLAKFTQIALPNSHPLLKKVLNYAKKHFSQCHMLSSSLLILNDTECFKKNYLLN-------WVYHA-------LECAHEKDISMHSLEE---------ILQKSHLPIRIKIMAQNTLLEKIEVKVLTF--GAEYALFITKHPIAKRFLRQKFSGCVFLETQDELHIRGDSERFWELIVTLNENRIVHNACLDFIYPNGFGKDSYTTMAERKLKECYKA------------LGFIKHENFSEVKKRYLELAKTYHPDLCD-----------LKEKKALYAKRFAIIQEAYSHIKKHA----------------------------------------------------------- |
| 4K7J Chain:A ((26-375)) | ----GLLTDYGNASASPWMKKLQSVAQGSGETFRILQIGDSHTAGDFFTDSLRKRLQKTWGDGGIGWVYPANVKGQRMAAVRHNGNWQSLTSRNNTGDFPLGGILAHTGSGGSMTLTASDGIASKQRVSLFAKPLLAEQTLTVNGNTVSA-----NGGGWQVLDTGAALPLTIHTEMPWDIGFINIENP-AGGITVSAMGINGAQLTQWSKWRADRMNDLAQTGADLVILSYGTNEAFNNNIDIADTEQKWLDTVRQIRDSLPAAGILIIGAPESLKNTLGVCGTRPVRLTEVQQMQRRVARQGQTMFWSWQNAMGGICSMKNWLNQGWAAKDGVHFSAKGYRRAAEMLADSLEELVRSA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66969 for 1664 contacts (-40.2/contact) +
2D Compatibility (PS) -24643 + (NN) 7135 + (LL) 1452
1D Compatibility (HY) -2400 + (ID) 1950
Total energy: -87375.0 ( -52.51 by residue)
QMean score : 0.115
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