Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVIKDAHFLTSSNNLSQCPASLTSEMVILGRSNVGKSTFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALTTTFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLIDARHLDLEIDKNAKENIQALLR--PDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTIHFNALSSKYPTLEIVRQTLLKYLLTNPL
1WF3 Chain:A ((4-168))
--------------------KTYSGFVAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILT------EGRRQIVFVDTPGLHKPMDAL--GEFMD---QEVYEALADVNAVVWVVDLRHPPTPEDELVA---RALKPLVGKVPILLVGNKLDAAKYPE--EAMKAYHELL-PEAEPRMLSALDERQV----AELKADLLALMP
General information:
TITO was launched using:
RESULT:
Template:
1WF3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69154 for 1288 contacts (-53.7/contact) +
2D Compatibility (PS) -17181 + (NN) -3152 + (LL) 3036
1D Compatibility (HY) -2400 + (ID) 1750
Total energy: -90601.0 ( -70.34 by residue)
QMean score : 0.340
(partial model without unconserved sides chains):
PDB file :
Tito_1WF3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WF3-query.scw
PDB file :
Tito_Scwrl_1WF3.pdb
: