Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------MSFSIGEFSELVGIPSSTLRFYEKEGLITPDRDKNNLRTYSEEDANWLKFLLHLKGAGLSIEELKQYTIWRTAGDSTISERLNMLKEKKIVLEQEIENLQKDLDTVVRKIGIYEEKVAKLDV
4R4E Chain:A ((1-83))
MSDNIRRSMPLFPIGIVMQLTELSARQIRYYEENGLIFPARTEGNRRLFSFHDVDKLLEIKHLIEQGVNMAGIKQILAKAEAE------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4R4E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32713 for 482 contacts (-67.9/contact) +
2D Compatibility (PS) -7944 + (NN) -2690 + (LL) 4508
1D Compatibility (HY) -4000 + (ID) 1150
Total energy: -43989.0 ( -91.26 by residue)
QMean score : 0.707
(partial model without unconserved sides chains):
PDB file :
Tito_4R4E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4R4E-query.scw
PDB file :
Tito_Scwrl_4R4E.pdb
: