Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MTYLVTGATGGLGGYALNYLKELVPMSDIYALVRSKEKGADLKAA----GFNIRVGDYSDAESMKQAFAGIDRVLFVSGAPGNRQVEH-------------ENVINAAKKAGVSYIAYTSFAGADKSTSALAEDHFFTEKVIEKSG-------IAHTFLRNNWYFENE---MPMIGGALSA--GKFVYAAENGKVGWALKREYAEVAAKAVAGAGFPEILELSGPLMTYEELTKALKEATGKDFDVISSDDKGFVENLVSVGLPQPV--AEMFLSFQHDIKNDQLDVTSDDFEKALGKPLTN------------RVDALRELLK |
| 2GN4 Chain:A ((16-344)) | QNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANPINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGEIFVPKIPSMKMTDLAKALAPNTPTKIIGIRPGEKLHEVMIPKDESHLALEFEDFFIIQPTISFQTPKDYTLTKLHEKGQKVAPDFEYSSHNNNQWLEPDDLLKLL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GN4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98001 for 2237 contacts (-43.8/contact) +
2D Compatibility (PS) -30295 + (NN) -10628 + (LL) 64
1D Compatibility (HY) -10800 + (ID) 2600
Total energy: -152260.0 ( -68.06 by residue)
QMean score : 0.366
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