Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---MSDKLSQEQIDALLSQMS----EGKVVDESTEIGDFGRFH---PYDFHKPEKFGAEHLESLKTIASAFTKKSMEFVSQR---------------IRIPIHTEATLADQV-------------------SFASGYIETMPNDSYIFCIIDLGNPELG----------------QIIIELDLAYIIYIHECLSGGNPKRKLSERRLLSVFEELTLKSILEKFCEALKDSFKSVHPISPEIVNIETNPALLRVTSPNDMMALVS---VDIKSEFWISTMRIG-----VPFFSVEEIMNKLENVVEYTFDKRRNFDAEVEQELHQVEKEARIRVGEIKTTWKELNKLEVGDVLLTETHIRDTLKGYVTEKWKFECYMGKSGNQKAV----------KFMRHTGRTEQER----------------------------------------------- |
4LZ6 Chain:A ((1-446)) | QKQQSERLGTEAIPKLLRSLSIPAMIGMFVMALYNVVDTIFISYAVGIEGVAGVTIAFPIMMIMMSMAGALGIGGASVISRRLGERRGEEANQVFGNILTVILVLSVIGFISAFTLLGPALQLFGATSVTQGYATDYLFPILLGSIFFFFAFAANNIIRSEGNATFAMVTMIVPAVLNILLDVLFIFGLNMGVLGASIATVIAQASVTGLVLRYFLTG---KSTLSLHWSDLRMKGSVIKEVCLVGLPAFVQQSSASLMMIAINSMLLRFGSDFYVGVFGLVQRIMMFVMMPMMGIMQAMQPIVGYNYGAKQY------SRLRETVMLGFKVATIFSIGIFALLMLFPEALLRVFTADREVIQAGVSAMHILFCVTFLIGAQIVAGGLYQSLGKPKQALILSLSRQIIFLIPLVLILPHIFGLSGVWWAFPIADVLSFILTVVLLYRDRNVFFLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LZ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16614 for 2393 contacts (6.9/contact) +
2D Compatibility (PS) -32539 + (NN) -1175 + (LL) 1084
1D Compatibility (HY) -21200 + (ID) 2700
Total energy: -39916.0 ( -16.68 by residue)
QMean score : 0.116
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