Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYEKARQMMIEAHSGQVRKITGEPYFSHPLNVARILRRAGFREEVVVAGLLHDAVEDTEM-TDADIRATFGDEVADLVASHTENKTLSWEERKAHTIEQVRTGNLEEKALIVADKLDNLTSVKYALSSEGKSVWSYFKRGYDLQKWYNQGIKNN-MEYGLNPSEIPPFFDEYARLVKWIFKK
4YF1 Chain:A ((28-186))--------------------TGEPYFSHPLNVARILRRAGFREEVVVAGLLHDAVEDTE-MTDADIRATFGDEVADLVASHTENKTLSWEERKAHTIEQVRTGNLEEKALIVADKLDNLTSVKYAL--SSKSVWSYFKRGYDLQKWYNQGIKNNMEY-GLNPSEIPPFFDEYARLVKWIFK-


General information:
TITO was launched using:
RESULT:

Template: 4YF1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 32905 for 1114 contacts (29.5/contact) +
2D Compatibility (PS) -16159 + (NN) -4118 + (LL) 2600
1D Compatibility (HY) 3200 + (ID) 2100
Total energy: 16328.0 ( 14.66 by residue)
QMean score : 0.280

(partial model without unconserved sides chains):
PDB file : Tito_4YF1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YF1-query.scw
PDB file : Tito_Scwrl_4YF1.pdb: