Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEFWRRSVFYEIYMKSFQDSNGDGLGDFKGLTSRLDYLVDLGIDGIWLTPFYPSPQVDNGYDVSDYCDINPDYGDMTDFRAFMKAADARGIKVIIDLVLNHSSTEHTWFKESRSSKTNPKRDYYIWRE-----------KPNNWESFFGGSAWEKDELTGEYYYHSFAKEQADLNWANEAVRAEM-EQVLAFWLNEGVAGFRLDVINNLTLVLEFPDNPV----ASGEMEHVYDRNQSGLEQALEDIASFCRKE----RDVFLVGEI--SSDKLPEIARYSSKKMLDVTFNF---NFGSVDQLDAKSVFTTLNEMETALNE--------GQWPTLFFGSHDMSRFRSRLA----SGDIVKTQLLAFLMLTAKGVPFIYYGEEVGMPDLTFSSVKEMRDIQGTAAYYQALQTGTDE-----KQALEIAIEKTRDKARGPMIF-----------PDGKP-FTLGEPWIKMATLPEE--EARMMWDFYQALLAFRKENDFKEM-----EYTFLKLDGEVL-----SYQRGEFIFLLHFGEEEITYPLQGN---YQLVFGEAMMVENGIRMGAHTGIALRVEE |
| 3A4A Chain:A ((13-564)) | -KWWKEATFYQIYPASFKDSNDDGWGDMKGIASKLEYIKELGADAIWISPFYDSPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDLVINHCSSEHEWFKESRSSKTNPKRDWFFWRPPKGYDAEGKPIPPNNWKSYFGGSAWTFDEKTQEFYLRLFCSTQPDLNWENEDCRKAIYESAVGYWLDHGVDGFRIDVGSLYSKVVGLPDAPVVDKNSTWQSSDPYTLNGPRIHEFHQEMNQFIRNRVKDGREIMTVGEMQHASDETKRLYTSASRHELSELFNFSHTDVGTSPLFRYNLVPFELKDWKIALAELFRYINGTDCWSTIYLENHDQPRSITRFGDDSPKNRVISGKLLSVLLSALTGTLYVYQGQELGQINFKNWPVEKYEDVE-IRNNYNAIKEEHGENSEEMKKFLEAIALISRDHARTPMQWSREEPNAGFSGPSAKPWFYLNDSFREGINVEDEIKDPNSVLNFWKEALKFRKAH--KDITVYGYDFEFIDLDNKKLFSFTKKYNNKTLFAALNFSSDATDFKIPNDDSSFKLEFG----------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3A4A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -154986 for 3999 contacts (-38.8/contact) +
2D Compatibility (PS) -52827 + (NN) -25866 + (LL) 2200
1D Compatibility (HY) -36800 + (ID) 8950
Total energy: -277229.0 ( -69.32 by residue)
QMean score : 0.441
|
|
|