Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKDIDWSNLGFSYIKTDKRYISYWKDGEWDEGALTEDNTLHISEGSTALHYGQQCFEGLKAYRCKDGSINLFRPDRNAARIQKSCERLLMPHIPTEKFIDAVMQVVRANEEFVPPYGTGATLYLRPFV----IGVGDNIGVHAAPEYIFSVFCSPVGPYFKGGMAPTNF--IVSDFDRAAPNGT-GAAKVGGNYAASLLPGQAAKERNFGDCIYLDPATHTKIEEVGSANFFGITKDDKFVTPYSPSILPSITKYSLLYLAEHRLGLEAVEGDVYIDKLDEFKEAGACGTAAVITPIGGIQTKDDFHVFHSETEVGPVTKRLFDELCGIQFGDVEAPEGWIYKVK
1IYE Chain:A ((5-308))-------------------KADYIWFNGEM---VRWEDAKVHVM--SHALHYGTSVFEGIRCYDSHKGPV-VFRHREHMQRLHDSAK---IYRFPVSQSIDELMEACRD----VIRKNNLTSAYIRPLIFVGDVGMGVNPPAGYSTDVIIAAF--PWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALD--VNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKE-LGIEVREQVLSRESLYLADEVFMSGTAAEITP---VRSVDGIQV--GEGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQVN


General information:
TITO was launched using:
RESULT:

Template: 1IYE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109100 for 2465 contacts (-44.3/contact) +
2D Compatibility (PS) -31805 + (NN) -11487 + (LL) 1440
1D Compatibility (HY) -16800 + (ID) 5050
Total energy: -172802.0 ( -70.10 by residue)
QMean score : 0.366

(partial model without unconserved sides chains):
PDB file : Tito_1IYE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1IYE-query.scw
PDB file : Tito_Scwrl_1IYE.pdb: