Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKSVNVIGAGLAGSEAVWQLVNRGVKVDLYEMRPVKQTPA------HHTDKFAELVCTNSLRANGLTNAVGVIKEEMRMLDSIIIEAADKASVPAGGALAVDRHEFSGYITDKVKNH-PLVTVHTEEVTTIPEGPTIIATGPLTSPALADEIKQLTGEEYLYFYDAAAPIIEKDSIDMDKVYLKSRYDKGEAAYLNCPMSEEEFNAFYEALVTAETAALKEFEKEVFFEGCMPIEVMAKRGIKTMLFGPLKPVGLEDPKTGKRPYAVLQLRQDDAAGTLYNMVGFQTHLK-WGEQKRVFGMIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRNDLFFAGQMTG--VEGYVESAASGLAAGINAANFIQE---KELVVFPTETAIGSLAHYITSASKKSFQPMNVNFGLFPELETKIRAKQERNEKLAERALNAIKKVAEEL |
| 4GF7 Chain:A ((10-379)) | KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGL---GALDDVLQGSHTPPTYETWMHN----KSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEA------DLIVG--------------------ADGVGSKVRDSIG---------FKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPR-VQRILYSPCNE---------NELYLGLMAPAADPRGSSVP-IDLEVWVEMFPFLEPCLIEAAKLKTARYDKYETTKLDSW--------------TRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEEGSSVEDALVAWETRIRPITDRCQALSGDYAANRSLSKGNMFTPAALEAARYDPLRRVYSWPQ---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35045 for 3157 contacts (-11.1/contact) +
2D Compatibility (PS) -36186 + (NN) 5150 + (LL) 5644
1D Compatibility (HY) -2800 + (ID) 2750
Total energy: -65987.0 ( -20.90 by residue)
QMean score : 0.237
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