Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVKSNIVKIGVCFAVLAVPVSQTTLPVFAAEQPGLKASQDNVNIPDSTFKAYLNGLLGQASTANITEAQMDSLTYITLANINVTDLTGIEYAHNIKDLTINNIHATNYNQISGLSNLERLRIMGADVTSDKIPNLSGLTNLTLLDLSHSAHDDSILTKINTLPKVTSIDLSYNGAITDIMPLKTMPELKSLNIQFDGVHDYRGIEDFPKLNTLLAYSQTIGGKKL--INSDIKSSKLTYNAENQTLYVPFSLMTERTVNYDGYVPDFVKSTASSDTYFTMNEQQVNGNRLTITSDGLTVSDVSKTDFDNLEKMEYNARIDLSYQSYNTPEQFQNGGSYTISMPIYDHYFTVDHSLNITADSEKTYIENQLVTEATFLSDIHAKTDDGSTVTSDFADKVDFNTPGTYTVTLQSENNAGLKATPVQVNVTIKAKTTITADEKITYKVDTSKTEAAFLADIKATTNDGTAITSDFATVVDLSKPGKYVVTLNAENDLQKALPVQVMVIVEKETPIPDPTPTPTPDPTPTPDPSPTPNPVINPNVNKPEVPSYKIPSLTVNEKKAKAEPSKEALPKTGDSLPVAGATVGFLLIGLSWFVSRKK |
1H6U Chain:A ((95-262)) | --------------------------------------------------------------------QYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQI--TNISPLAGLTNLQYLSIGNA-QVSDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H6U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109471 for 1275 contacts (-85.9/contact) +
2D Compatibility (PS) -16733 + (NN) 2418 + (LL) 21980
1D Compatibility (HY) -11200 + (ID) 1650
Total energy: -114656.0 ( -89.93 by residue)
QMean score : 0.470
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