Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -MEIIKISPRGYCYGVIDAMVIAKNASLDPNLPRPIHILGMIVHNKHVTDAFESIGIYTVDGANREEILDKITTG-TVIFTAHGVSPSVKAKAVAKGLTTIDATCPDVLHTYNLILEKQAAGYEIIYIGKKGHPEPEGAYGTAPD---VVHLVETKADIDALSLLSDKIFVTNQTTMSKWDVADLMHYIKGKFPKAIQHQEICMATQVRQEAVALQAKDADLTIVVGDPRSNNTARLAQVSIEKAGTKAYRIADITELDIEWIKDAKKVAVTAGASTPTQLVREVLLFLEQFDAADKTTWKREHNQDFERILPKTKNKYMAEKRSQRLAHLKNGGS |
3DNF Chain:A ((1-281)) | MVDIIIAEHAGFCFGVKRAVKLAEESL--KESQGKVYTLGPIIHNPQEVNRLKNLGVFPSQG-------EEFKEGDTVIIRSHGIPPEKEEALRKKGLKVIDATCPYVKAVHEAVCQLTREGYFVVLVGEKNHPEVIGTLGYLRACNGKGIVVETLEDIGEALK-HERVGIVAQTTQNEEFFKEVVGEIALWVKEVKVINTICNATSLRQESVKKLAPEVDVMIIIGGKNSGNTRRLYYISKEL-NPNTYHIETAEELQPEWFRGVKRVGISAGASTPDWIIEQVKSRIQEI-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162481 for 2247 contacts (-72.3/contact) +
2D Compatibility (PS) -29996 + (NN) -10594 + (LL) 3704
1D Compatibility (HY) -14400 + (ID) 4200
Total energy: -217967.0 ( -97.00 by residue)
QMean score : 0.522
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