Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTMYAKNNTSGKDMLSLLEWNKEELTDIIKLAVAMKTNPAHYSHILSGKILG----MIFDKPSTRTRVSFEAGILQLGGQAIVMSSKELQIGRGEPIKDTAHVMSEYIDAIMIRTFSHEKVEELAYHAEIPIINGLTDLHHPCQALADLMTIYEWKD--QLEGIKLAYIGDG-NNVCHSLLLAGAMVGIDIRLAMPKGYEVDETILAKAENLAKQSGGKIFVTEDSKLAVTDADFIYTDVWTSMGQEDENAKRLADFGEKYQVNAELV-SGAKPDYHFLHCLPA-HREE----------------EVTTEIIDGIHSVIYQQAGNRLHAQKALLAAILEAK
4JFR Chain:A ((28-356))-------NLRNRNFLKLLDFSTKEIQFLIDLSADLKK--AKYAGTEQKKLLGKNIALIFEKASTRTRCAFEVAAFDQGAQVTYIGPSGSQIGDKESMKDTARVLGRMYDGIQYRGFGQAIVEELGAFAGVPVWNGLTDEFHPTQILADFLTMLEHSQGKALADIQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYTDVWVSMGESPEAWDERVALMKPYQVNMNVLKQTGNPNVKFMHCLPAFHNDETTIGKQVADKFGMKGLEVTEEVFESEHSIVFDEAENRMHTIKAVMVATL---


General information:
TITO was launched using:
RESULT:

Template: 4JFR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -200888 for 2623 contacts (-76.6/contact) +
2D Compatibility (PS) -33549 + (NN) -18398 + (LL) 780
1D Compatibility (HY) -26400 + (ID) 6350
Total energy: -284805.0 ( -108.58 by residue)
QMean score : 0.541

(partial model without unconserved sides chains):
PDB file : Tito_4JFR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JFR-query.scw
PDB file : Tito_Scwrl_4JFR.pdb: