Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSFNWQTEKVYEEIKYESYEGIAKITINRPEVHNAFTPKTVTEMIDAFNLARDNSNLGVIILTG-----EGEKAFCSGGDQKVRGHGGYVGDDQIPRLNVLDLQRLIRVIPKPVIAMVAGWSIGGGNVLQLVCDLTIAADNAKFGQTGPNVGSFDAGYGSGYLARVIGHKKAKEVWFMCRQYTADEALEMGWINTVVPVADLEKETVAWAKEMLQKSPTALRFIKAAFNADTDGLAGIQQLAGDATLLYYTTDEAKEGRDAFKEKRDPDFDQFPKFP |
4I52 Chain:F ((2-275)) | ---DWHIAKHYDDILYYKAGGIAKIVINRPHKRNAFRPQTVFELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGDQSVRGEGGYIDDQGTPRLNVLDLQRLIRSMPKVVIALVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGFGSSYLARIVGQKKAREIWYLCRQYSAQEAERMGMVNTVVPVDRLEEEGIQWAKEILSKSPLAIRCLKAAFNADCDGQAGLQELAGNATLLYYMTEEGSEGKQAFLEKRPPDFSQYPWLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I52.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94111 for 2150 contacts (-43.8/contact) +
2D Compatibility (PS) -29785 + (NN) -14980 + (LL) 312
1D Compatibility (HY) -29200 + (ID) 8700
Total energy: -176464.0 ( -82.08 by residue)
QMean score : 0.493
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