Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKVRGFEVVNEASRKFPEQTISLPIRGDKGSAGYDFFSNETVTIVPGEKHIFWTDIKSYMQEDEVLNIYVRSSIGIKKGLLLCNGTGIIDSSYYSNPGNDGNIGIAIKNFSNEPVSIEAGERVAQGVFQKYLV-ADTD---I-VANESRVGGVGSTGR
3F4F Chain:A ((32-163))
--------------QLRSASATVPTKGSATAAGYDIYASQDITIPAMGQGMVSTDISFTVPVGTYGRIAPRSGLAVKNGIQTG--AGVVDRDYT------GEVKVVLFNHSQRDFAIKKGDRVAQLILEKIVDDAQIVVVDSLEESARGAGGFG----
General information:
TITO was launched using:
RESULT:
Template:
3F4F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56198 for 828 contacts (-67.9/contact) +
2D Compatibility (PS) -13455 + (NN) -2 + (LL) 344
1D Compatibility (HY) -5200 + (ID) 1650
Total energy: -76161.0 ( -91.98 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_3F4F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F4F-query.scw
PDB file :
Tito_Scwrl_3F4F.pdb
: