Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MKLGIMGTNWITDSFIEG--AINSGEWNLTAVYSRTEEKARAFGEKYGELTYFTDIEEMGKSDALDAVYIASPNALHYQHAVSLLKNKKHVIVEKPIFSTVAELEHAHQIARENNVFLFEAARHIQEPNFKRLQENIEKVGTIHGATLAYMKYSSRYDQVLNGEEPNIFSLKFSGGSIVDLGVYPLYSAITLFG--EPVKATYFATKLPTGVDGLGPIILEYPT-FNITIIQGKNSQSFLPSEIYGQKGTLIVD-PLTGIEKITFYDNATKEETELAG----PVVANDMQFEAAEFARIIEQSDRDTYEYLADLSLKVLRVSNELRHQNDIWFDAEK |
| 2O4U Chain:X ((2-332)) | ALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLAQ-GTLGDLRVARAEFGKNLTH-----VPRAVDWAQAGGALLDLGIYCVQFISMVFGGQKPEKISVMGRRHETGVDDTVTVLLQYPGEVHGSFTCSITAQLSNTASVSGTKGMAQLLNPCWCPTELVVKGEHKEFLLPPVPKNCNFDNGAGMSYEAKHVRECLRKGLKESPVIPLVESELLADILEEVRRAIGVTFPQD- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130464 for 2845 contacts (-45.9/contact) +
2D Compatibility (PS) -34757 + (NN) -12774 + (LL) 476
1D Compatibility (HY) -11600 + (ID) 3250
Total energy: -192369.0 ( -67.62 by residue)
QMean score : 0.418
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