Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METVLQAKNVRKIYGSKGNVYTALENISIDIKEGEFTGIMGPSGAGKSTLLNVLSTIDKPTSGQIVISGQELE----NMNEQQMSTFRRDKLGFIFQDYNLLDTLTIRENIIL-PLALAKRPVKEMEEKLAIISEKFGITEILDKYPSEISGGQKQRTAASRAIITSPSLIFADEPTGALDSKSATNLLESLRDLNEQDKSTIMMVTHD-AFAASFCKRILFIKDGELYTEIYRGTKTRKEFFQKILDVLAKLGGDSDDVI |
| 3C41 Chain:J ((1-219)) | ----LQMIDVHQLKKSFGSL-EVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINLKAKDTNLNKV------REEVGMVFQRFNLFPHMTVLNNITLAPMKVRKWPREKAEAKAMELLDKVGLKDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQL-ANEGMTMVVVTHEMGFAREVGDRVLFMDGGYIIEE------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C41.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78245 for 1736 contacts (-45.1/contact) +
2D Compatibility (PS) -23159 + (NN) -8772 + (LL) 3112
1D Compatibility (HY) -20000 + (ID) 3850
Total energy: -130914.0 ( -75.41 by residue)
QMean score : 0.418
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