Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRFFIDTANVEEIKKANRMGFISGVTTNPSLVAKE---GRDFNEVIQEITSIVDGPISGEVVSLEADEMIAEGRVIAKIHPNMVVKIPMTGEGLAAVKVLTEEGIKTNVTLVFSATQALLAARAGATYVSPFLGRLDDIGDDGLVLIRDIADIFEIHGIPTEIISASVRHPIHVIECAKAGADIATVPFKVFEQMLKHPLTDSGIDKFLADWEAAKK
3S1X Chain:C ((1-213))
MKIFLDTANIDEIRTGVNWGIVDGVTTNPTLISKEAVNGKKYGDIIREILKIVDGPVSVEVVSTKYEGMVEEARKIHGLGDNAVVKIPMTEDGLRAIKTLSSEHINTNCTLVFNPIQALLAAKAGVTYVSPFVGRLDDIGEDGMQIIDMIRTIFNNYIIKTQILVASIRNPIHVLRSAVIGADVVTVPFNVLKSLMKHPKTDEGLAKFLEDWK----
General information:
TITO was launched using:
RESULT:
Template:
3S1X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130338 for 1722 contacts (-75.7/contact) +
2D Compatibility (PS) -23123 + (NN) -6960 + (LL) 416
1D Compatibility (HY) -24400 + (ID) 5700
Total energy: -190105.0 ( -110.40 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_3S1X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S1X-query.scw
PDB file :
Tito_Scwrl_3S1X.pdb
: