Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLENDIKKVLYSEEDIILKTKELGAKLTADYAGK------NPL-LVGVLKGSVPFMAELLKHI---DTHVEIDFMVVSSYHGGTTSSGEVKILKDVDTNIEGRDVIFIEDIIDTGRTLKYLRDMFKYRQANSVKVATLFDKPEGRLVDIDADYVCYDIPNEFIVGFGLDYAENYRNLPYVGVLKEEIYSK
1I0L Chain:A ((9-192))
------EKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVSSYGEGLTSSGQVRMLLDTRHSIEGHHVLIVEDIVNTALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPFSADYVVANIPNAFVIGYGLDYDDTYRELRDIVVLRPEVYAE
General information:
TITO was launched using:
RESULT:
Template:
1I0L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116875 for 1304 contacts (-89.6/contact) +
2D Compatibility (PS) -19219 + (NN) -6849 + (LL) 536
1D Compatibility (HY) -20800 + (ID) 4000
Total energy: -167207.0 ( -128.23 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_1I0L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I0L-query.scw
PDB file :
Tito_Scwrl_1I0L.pdb
: