Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------MGIKVYKPTTNGRRNMTSLDFAEITTNTPEKSLLVSLKNKAGRN----NNGRITVRHQGGGHKRHYRLIDFKRNKDGVEAVVKTIEYDPNRT---ANIALVHYTDGVKAYILA---------PKGLEVGQRIISGPEADIKVGNALPLANIPVGTVIHNIELQPGKGAELIRAAGASAQVLGQEGKY-VLVRLQSGEVRMILGTCRATIGTVGNEQQSLVN----IGKAGRNR-------WKGVRPT-VRGSVMNPNDHPHGGGEGKAPVGRKAPSTPWGKPALGLKTRNKKAKSDKLIVRRRNQK-- |
| 4RNZ Chain:A ((1-369)) | MERLVWDKLTLLGFLEKNHIPQKLYYNLSSQDKELSAEIQSNVTYYTLRDANNTLIQALIPISQDLQIHIYKK-----GEDYFLDFIPIIFTRKEKTLLLSLQTSPYQDIIKATNDPLLANQLMNAYKKSVPFKRLVKND--KIAIVYTRDYRVGQAFGQPTIKMAMVSSRSNQYYLFSHSNGHYYDSKAQEVAGFLLETPVKYTRISS--PFSYGRFHRPHYGVDYAAKHGSLIHSASDGRVGFMGVKAGYGKVVEIHLNELRLVYAHMSAFAN--GLKKGSFVKKGQIIGRVGSTGPHLHFGVYKNSRPINPLGYIRTAKSKLHG---KQREVFLEKAQRSKQKLEELLKTHSFEKNSFYLLEGFLEHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RNZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5370 for 1736 contacts (3.1/contact) +
2D Compatibility (PS) -26921 + (NN) 4965 + (LL) 28
1D Compatibility (HY) -12800 + (ID) 2750
Total energy: -32108.0 ( -18.50 by residue)
QMean score : 0.259
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