Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKVRGFELVSQFSNKELLPKRETAHAAGYDLKVAKKTVIEPGEITLVPTGIKAHMQPGEVLYLYDRSSNPRKKGIVLINSVGVIDGDYYNNQVNEGHIFAQMQNITDQAVILEEGERIVQAVFAPFL-----LADDDQATGMRTGGFGSTGK
2OL1 Chain:A ((8-131))
-----SPVRFVKETNRAKSPTRQSPGAAGYDLYSAYDYTIPPGERQLIKTDISMSMPKFCYGRIAPRSGLSL-KGIDIG--GGVIDEDY------RGNIGVILINNGKCTFNVNTGDRIAQLIYQRIYYPELEEVQSL---------------
General information:
TITO was launched using:
RESULT:
Template:
2OL1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46478 for 800 contacts (-58.1/contact) +
2D Compatibility (PS) -12701 + (NN) -1384 + (LL) 692
1D Compatibility (HY) -2000 + (ID) 1800
Total energy: -63671.0 ( -79.59 by residue)
QMean score : 0.435
(partial model without unconserved sides chains):
PDB file :
Tito_2OL1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OL1-query.scw
PDB file :
Tito_Scwrl_2OL1.pdb
: